Chapter 9 Data & Uncertainty: Inversion, Constraints & Propagation


I. Abstract & Scope
This chapter defines an integrated workflow for oriented-tension problems that joins data → parameters → derived quantities: a unified DatasetBundle, registered likelihood families and priors, posterior computation with evidence, and uncertainty propagation—via linearization and sampling—to constitutive/coupling parameters and the energy ledger (EDX), harmonized with dominance masks. All symbols use English notation in backticks; SI units apply. If ToA fields are present, both forms must be recorded in parallel with explicit {gamma(ell), d ell}.

II. Dependencies & References

III. Normative Anchors (added in this chapter, S80-/M80-)

IV. Body Structure


I. Background & Problem Statement


II. Key Equations & Derivations (S-series)

  1. S80-12 (Posterior & evidence): p(θ|D) ∝ L(D|θ) π(θ), Z = ∫ L π dθ; evidence ratio K = Z_1/Z_0 supports model comparisons (with/without coupling, isotropic/anisotropic, etc.).
  2. Likelihood exemplars:
    • Gaussian: log L_G = − (1/2) (y − 𝒦[θ])^T Σ^{-1} (y − 𝒦[θ]) + const.
    • Poisson: log L_P = ∑_i ( k_i log λ_i(θ) − λ_i(θ) − log k_i! ).
    • Mixed/correlated noise: via covariance kernels or spectral PSDs.
  3. S80-13 (Delta/Fisher propagation): Cov_g ≈ J_g (F + Π)^{-1} J_g^T, for g(θ) ∈ {𝒫_*, Φ_E, W_orient, c(ê), Δn(ê)}.
  4. S80-14 (Predictive distribution): p(y_*|D) = ∫ p(y_*|θ) p(θ|D) dθ for banded ledgers and masked predictions.

III. Methods & Flows (M-series)

  1. M80-25 DatasetBundle & Priors
    • Collect {polarimetry, transport, waves, mechanics} with UnitsAudit.log.
    • Register priors from ModelCard/ParameterCard within physical feasibility.
    • Integrate R_inst, covariances, and see: anchors to form DatasetBundle.
  2. M80-26 Likelihoods & Noise
    • Choose L_G/L_P/L_mix with correlated-noise kernels as needed.
    • Fold deconvolution/regularization residual spectra from Chapter 5 into noise estimates.
    • Apply dominance-mask weights across energy/frequency bands.
  3. M80-27 Posterior & Evidence
    • Run nested sampling/SMC to obtain {posterior, Z, logZ}.
    • Output marginals, correlation matrices, and convergence diagnostics.
    • Produce evidence comparisons for {with/without coupling, isotropic/anisotropic}.
  4. M80-28 Uncertainty Propagation
    • Linearization: compute J_g and Cov_g.
    • Sampling: push posterior draws through the forward map 𝒦 to {𝒫_*, Φ_E, W_orient, c(ê), Δn(ê)}.
    • Produce energy ledgers and directional/banded confidence envelopes.
  5. M80-29 Physical-Constraint Enforcement
    • Soft: add penalties in the objective (positivity/objectivity/symmetry).
    • Hard: reparameterize (e.g., D_eff = L L^T).
    • A posteriori: discard infeasible samples.
  6. M80-30 Mask Harmonization & Prediction
    • Embed η_dom masks in likelihoods and predictive averaging.
    • Generate segmented predictions/uncertainties without cross-channel leakage.
    • Output partitions consistent with Chapter 7 ledgers.

IV. Cross-References within/beyond this Volume


V. Validation, Criteria & Counterexamples

  1. Positive criteria:
    • Models with coupling/anisotropy show significantly higher logZ than baselines and reduce ledger-closure residuals.
    • Predictive intervals achieve nominal coverage on independent data.
    • Physical constraints (positivity, objectivity, symmetry) are satisfied with no systematic residual bias.
  2. Negative criteria:
    • Removing key couplings or collapsing Q_ij to isotropy does not reduce evidence.
    • Large, unexplained discrepancies between Fisher-based and sampling propagation.
    • Banded ledgers inconsistent with global ledgers beyond CIs.
  3. Contrasts:
    • Evidence/prediction differences among {Gaussian, Poisson, Mixed} noise models.
    • Confidence-band comparisons {linearization vs sampling}.
    • {with mask vs without mask} impacts on leakage.

VI. Deliverables & Figure List

  1. Deliverables:
    • DatasetBundle.tar (data, covariances, R_inst, units/dimensions).
    • Posterior.zarr (parameter posteriors & correlations), Evidence.txt.
    • Predictive.nc (predictive bands for derived quantities & ledgers).
    • ConstraintReport.md (physical-constraint and feasibility checks).
  2. Figures/Tables (suggested):
    • Tab. 9-1 Likelihood & prior registry checklist.
    • Fig. 9-1 Posterior marginals and correlation heatmaps.
    • Tab. 9-2 Consistency of Fisher vs sampling propagation.
    • Fig. 9-2 Closure comparison: banded vs global ledgers.
    • Tab. 9-3 Evidence comparisons and positive/negative criteria summary.